| In Fall 2003 we started a regular Chemotaxis-meeting. The
main purpose is to study mathematical problems related to
chemotaxis modeling, exchange of new ideas and methods and to
discuss overlab with other disciplines. The first couple of
meetings were used to formulate interesting open problems (as
of today).
Unfortunately, the term "chemotaxis" is used differently
in the biological and mathematical literature. In experiments
chemotaxis and chemokinesis are distinguished. Roughly speking,
chemotaxis refers to directional changes, like active choice of
a preferred direction, whereas chemokinesis refers to undirected
change, like increasing the turning frequency. A universal
definition of these terms has been attempted in the early 1990's but
it only cause in elaborate discussions. For a mathematical
model which bases on the individual movement of the members of the
species (like transport models or Monte Carlo simulations) this
difference is important, but on the macroscopic level (Keller-Segel
ype models) this difference is un-important. To avoid conflicts it is
better to talk about chemosensitive movement, which includes
chenotaxis and chemokinesis.
Note, the points of view expressed here are not public
opinion, they reflect the personal judgements of the
corresponding author.
| Nov. 04, 03 |
Thomas
Hillen: Open and solved problems in chemotaxis
Since the
early papers about chemotaxis (Patlak 1953,
Keller-Segel 1970) the mathematical investigation of
chemosensitive movement has flourished. In
particular, after the ground breaking results on
blow-up solutions by Jaeger and Luckhaus (1990) a whole
industry for mathematical analysis of chemotaxis models has
developed. Many interesting and challenging problems could be
solved up to date.
At the last
SIAM Dyn. Syst. meeting in Snwobird (2003) we
discussed among colleagues what are the interesting
open problems in this area which are worthwhile to
study. This is a very good question. In my point of
view the following items are well understood and give
only little room for improvement. Obviously, one
could sharpen an estimate here, proof existence under slightly
weaker assumptions there etc. but this is getting tedious.
Well
understood:
-
The
derivation of classical chemotaxis models is well
understood. I have seen derivations from specific
random walk descriptions (Patlak 1953), from
Fickian-assumptions (Keller-Segel), from
continuous transport equations (Alt, Dickinson,
Tranquillo, Hillen, Othmer etc.) rigorous derivations from
reinforced random walks (Stevens), derivations from
Langevin equations (Erdmann, Hillen, Hadeler, Lutscher),
and lately a derivation from fluid dynamical principles
(Byrne and Owen). The model appears again and again and it
is justified to study this model in detail
-
Blow-up
is well understood. It is almost impossible to
keep up with the vast literature on blow-up
solutoins for chemotaxis. It was very timely that
Dirk Horstmann wrote two reviews about this area
(2003, 2004 Jahresberichte DMV). The first review
summarizes all known results on finite time blow-up
and describes the historical development. The second
review deals with traveling wave
solutions.
-
Applications
to Dictyostelium discoideum, Salmonella
typhimurium, Eschirichia coli. The
chemotaxis model and variations of it have been
proven to be capable to describe chemotaxis for
the above mentioned species (Dallon, Othmer, Ford,
Lauffenburger, Rivero et al, Tyson et al, Dolak, Hillen).
The chemotaxis models need new challanges!
Open
questions:
-
Pattern
formation. Pattern formation for chemosensitive moevemtn
models has not nearly been investigated in such a great
detail as blow-up. Although, if these models have been
used to describe experiments (e.g. Rivero, Tranquillo,
Buettner, Lauffenburger, or Ford et al, Tyson et al,
Dolak), then always models are used whose solutions
do not blow up in finite time. Various mechanisms are able
to prevent blow-up: (i) saturation effects, (ii) volume
filling effects, (iii) quorum sensing effects, (iv) finite
sampling radius (see Hillen+Schmeiser, in preparation).
The corresponding models for chemosensitive movement show
interesting properties of pattern formation (as shown in
Hillen, Painter, and Painter, Hillen, and Dolak+Hillen).
It is a wide open field to understand these patterns in
detail, understand underlying bifurcations, find the
global attractor, study appropriate asymptotic scalings,
compare to experiments etc. etc. In all those questions
preliminary results have appeard recently (Potapov,
Hillen, Osaki, Yagi, Wrzosek).
-
Global
existence for the quorum sensing model. No more details,
sorry, because we are working on this right now.
-
Hopf-bifurcations
in the quorum sensing model (again no details).
-
Other
applications, for example in cancer modeling, e.g.
angiogenesis, (Levine, Sleeman, Chaplain, Anderson) or
tumor growth and endothelial cell movement (Owen, Byrne,
Preziosi's group, Bellomo's group), or chemotaxis in the
immune response (is there literature?).
-
Underlying
energy prinicple: For most of the modified models (i)-(iv)
there is no Lyapunov-function known, or no energy
functional. Although, numerical solutions behave as if
there was an energy which the solutions try to minimize
(Painter, Hillen).
-
Continuation
after blow-up: Some groups work on the continuation of
solutions after blow-up. I don't see the point. If blow-up
has happend the model has proven itself as un-useful for
further description. Why continue after blow-up? Can
anyone explain to me why this is important?
thillen(at)ualberta(dot)ca
|
| Nov. 18, 04 |
Alex Potapov: Relations to
physical models for dropplets, the role of surface
tension. |
| Dec. 02, 04 |
Joanna Renclawowicz: The Nagai
problem; blow-up in finite or infinite time |
Dec. 11, 04
|
Brian Sleeman (Leeds): Chemotaxis and Angiogenesis
|
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